• 2010 CSHL course in Advanced Sequencing Technologies & Applications
  "This intensive 2 week course will explore applications of next generation sequencing technologies, with a focus on commercially available methods. "
  in Public bookmarks with bioinformatics biotechnology sequenceanalysis
• Bioinformatics
  in Public bookmarks with bioinformatics linkageanalysis ndar sequenceanalysis
• BoxShade Server
  in Public bookmarks with bioinformatics sequenceanalysis by 2 users
• Dotter
  "Dotter is a graphical dotplot program for detailed comparison of two sequences. Here, every residue in one sequence is compared to every residue in the other sequence. The first sequence runs along the x-axis and the second sequence along the y-axis. In regions where the two sequences are similar to each other, a row of high scores will run diagonally across the dot matrix. If you're comparing a sequence against itself to find internal repeats, you'll notice that the main diagonal scores maximally, since it's the 100% perfect self-match."
  in Public bookmarks with bioinformatics nihlbio sequenceanalysis visualization
• EBI Tools: Pairwise Alignment algorithms form
  
  EBI Tools: Pairwise Sequence Alignment
  alignment emboss needle pairwise water
  in Public bookmarks with bioinformatics sequenceanalysis
• EBI:: Tools:: Pairwise Alignment algorithms form
  "This tool is used to compare 2 sequences."
  in Public bookmarks with bioinformatics sequenceanalysis
• Galaxy
  "Galaxy allows you to do analyses you cannot do anywhere else without the need to install or download anything. You can analyze multiple alignemnts, compare genomic annotations, profile metagenomic samples and much much more ..."
  in Public bookmarks with bioinformatics genomics sequenceanalysis
• Genome Evolution Laboratory - Mauve Genome Alignment Software
  "Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion."
  The Genome Evolution Laboratory, directed by Prof. Nicole T. Perna, performs research into rates and patterns of adaptive genome evolution in animal and plant associated microbes. Our research involves experimental characterization of pathogens and computational modeling of genome evolution.
  alignment bacteria caratovora chrysanthemi comparative enteric erwinia evolution gamma-proteobacteria ge genome pathogens plant
  in Public bookmarks with genomics sequenceanalysis
• Index of ftp://ftp.cgb.ki.se/pub/prog/belvu/
  Belvu
  in Public bookmarks with bioinformatics sequenceanalysis
• MUltiple Sequence Comparison by Log-Expectation
  "MUSCLE is claimed to achieve both better average accuracy and better speed than CLUSTALW or T-Coffee, depending on the chosen options."
  in Public bookmarks with bioinformatics sequenceanalysis by 2 users
• NCGR, Kognitio Adapt WX2 Database for Rapidly Expanding Second-Gen Sequencing Data | BioInform | Informatics | GenomeWeb
  in Public bookmarks with database genomics sequenceanalysis
• Pfam: Home page
  "The Pfam database is a large collection of protein families, each represented by multiple sequence alignments and hidden Markov models (HMMs)."
  in Public bookmarks with bioinformatics proteomics sequenceanalysis by 2 users
• Short Read Aligners Update at AGBT | MassGenomics
  in Public bookmarks with bioinformatics sequenceanalysis
• Softberry
  Bioinformatics software for genome annotation and analysis of next generation sequencing data
  in Public bookmarks with bioinformatics genomics sequenceanalysis software
• UnoSeq - Expression profiling with next generation sequencing without a ...
  "UnoSeq is a Java library to analyze next generation sequencing data (e.g. data generated by Illumina's mRNAseq method) and especially perform expression profiling in organisms where no well-annotated reference genome exists. The library can help you to extend your mRNAseq sequencing and transcription profiling approaches to any species you like."
  in Public bookmarks with bioinformatics geneexpression genomics opensource sequenceanalysis sequenceassembly
• Web Service for MUltiple Sequence Comparison by Log-Expectation
  in Public bookmarks with bioinformatics sequenceanalysis webservices

sequenceanalysis from all users