• [progenetix.net] online CGH database
  cytogenetic abnormalities in human cancer
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• 1000 Genomes
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• 3D-GENOMICS
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• 5.2 KARYOTYPES, CHROMOSOMES, AND TRANSLOCATIONS
  description of cytogenetic band nomenclature
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• Affymetrix - Learning Center, GTYPE 4.1 Overview
  "The Affymetrix GeneChip® Genotyping Analysis Software (GTYPE) 4.1 is part of the GeneChip Mapping Array System, specifically designed to give highly accurate, automated SNP allele calls for the GeneChip Mapping Arrays."
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• Apollo Documentation
  "Apollo is a genome annotation viewer and editor."
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• Apollo Genome Annotation Curation Tool
  "Apollo is a genome annotation viewer and editor. It was developed as a collaboration between the Berkeley Drosophila Genome Project (part of the FlyBase consortium) and The Sanger Institute in Cambridge, UK. Apollo allows researchers to explore genomic annotations at many levels of detail, and to perform expert annotation curation, all in a graphical environment. It was used by the FlyBase biologists to construct the Release 3 annotations on the finished Drosophila melanogaster genome, and is also a primary vehicle for sharing these annotations with the community. The Generic Model Organism Database (GMOD) project, which aims to provide a complete ready-to-use toolkit for analyzing whole genomes, has adopted Apollo as its annotation workbench. Apollo is...
  in Public bookmarks with browser genomics nihlbio visualization
• Artemis: DNA Sequence Viewer and Annotation Tool - Wellcome Trust ...
  "Artemis is a free genome viewer and annotation tool that allows visualisation of sequence features and the results of analyses within the context of the sequence, and also its six-frame translation. "
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• Asterias
  " Asterias includes now applications for the analysis of genomic (and, to a lesser extent, proteomic) data that cover from data normalization to development of prediction models for survival data."
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• bedtools - Project Hosting on Google Code
  "The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage."
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• BioDiscovery Microarray Analysis Software and Services :: Nexus Copy Number – Accelerating Copy Number Analysis Research
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• Cancer Genome Workbench
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• Cancer Genomics Browser at UCSC
  in Public bookmarks with bioinformatics cancer genetics genomics software
• CGL Home Page
  Comparative Genomics Library
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• Cinteny - Server for Synteny and Genome Rearrangement Analysis
  "Cinteny server can be used for finding regions syntenic across multiple genomes and measuring the extent of genome rearrangement using reversal distance as a measure."
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• Circos - visualize genomes and genomic data
  "Circos is a software package for visualizing data and information. It visualizes data in a circular layout — this makes Circos ideal for exploring relationships between objects or positions."
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• Clone|Gene ID Converter
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• CMA Portal
  The Cancer Genome Atlas (TCGA) data will be accessed through this portal.
  in Public bookmarks with bioinformatics genomics nih
• Copy Number Variation Project
  "Genetic diseases are caused by a variety of different possible alterations (mutations) in DNA sequences. We are investigating gains and losses of large chunks of DNA sequence consisting of between ten thousand and five million letters (known as Copy Numb
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• Database of Genomic Variants
  "A curated catalogue of structural variation in the human genome"
  in Public bookmarks with bioinformatics database genomics

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genomics from all users