http://netvouz.com/bioinformatics/tag/sequenceanalysis?feed=rss bioinformatics's bookmarks tagged "sequenceanalysis" on Netvouz http://meetings.cshl.edu/courses/c-seqtech10.shtml "This intensive 2 week course will explore applications of next generation sequencing technologies, with a focus on commercially available methods. " bioinformatics Thu, 12 Aug 2010 16:27:21 GMT http://helix.nih.gov/apps/bioinfo/ bioinformatics Fri, 08 Dec 2006 22:24:24 GMT http://www.ch.embnet.org/software/BOX_form.html bioinformatics Mon, 23 Jun 2008 18:59:47 GMT http://sonnhammer.sbc.su.se/Dotter.html "Dotter is a graphical dotplot program for detailed comparison of two sequences. Here, every residue in one sequence is compared to every residue in the other sequence. The first sequence runs along the x-axis and the second sequence along the y-axis. In regions where the two sequences are similar to each other, a row of high scores will run diagonally across the dot matrix. If you're comparing a sequence against itself to find internal repeats, you'll notice that the main diagonal scores maximally, since it's the 100% perfect self-match." bioinformatics Wed, 08 Sep 2010 15:38:30 GMT http://www.ebi.ac.uk/emboss/align/ bioinformatics Mon, 02 Apr 2007 20:11:46 GMT http://www.ebi.ac.uk/Tools/emboss/align/index.html "This tool is used to compare 2 sequences." bioinformatics Fri, 13 Feb 2009 15:16:08 GMT http://galaxy.psu.edu/ "Galaxy allows you to do analyses you cannot do anywhere else without the need to install or download anything. You can analyze multiple alignemnts, compare genomic annotations, profile metagenomic samples and much much more ..." bioinformatics Fri, 28 Aug 2009 14:26:31 GMT http://gel.ahabs.wisc.edu/mauve/ "Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion." bioinformatics Mon, 02 Apr 2007 16:16:52 GMT ftp://ftp.cgb.ki.se/pub/prog/belvu/ Belvu bioinformatics Mon, 23 Jun 2008 18:35:27 GMT http://www.ebi.ac.uk/muscle/ "MUSCLE is claimed to achieve both better average accuracy and better speed than CLUSTALW or T-Coffee, depending on the chosen options." bioinformatics Thu, 05 Apr 2007 14:11:05 GMT