- Affymetrix - Affymetrix Power Tools
"The Affymetrix Power Tools (APT) contains C++ source code for analyzing Affymetrix data and a set of command line tools built on this source code."
in Public bookmarks - Affymetrix - GeneChip® Command Console™ Beta Software Download (AGCC)
in Public bookmarks - Affymetrix - Learning Center, GTYPE 4.1 Overview
"The Affymetrix GeneChip® Genotyping Analysis Software (GTYPE) 4.1 is part of the GeneChip Mapping Array System, specifically designed to give highly accurate, automated SNP allele calls for the GeneChip Mapping Arrays."
in Public bookmarks - Apple - Support - Downloads - Java 2 SE 5.0 Release 3
in Public bookmarks - Cancer Genomics Browser at UCSC
in Public bookmarks - encfs
"EncFS provides an encrypted filesystem in user-space. It runs without any special permissions and uses the FUSE library and Linux kernel module to provide the filesystem interface."
in Public bookmarks - Geneious
"Geneious does sequence alignment, 3D structure visualization, phylogenetic tree building, sequence analysis, publication-search and more; all in a single application."
in Public bookmarks - HSLS: MolBio Licensed Tools
"HSLS provides access (authorized users) to authoritative Omics software, databases, books, and journals for systems and molecular biology"
in Public bookmarks - NoSquint: Firefox Extension
"NoSquint is a Firefox extension that allows you to adjust the default text zoom level, which is very useful if you have a small display or run at a very high resolution."
in Public bookmarks - O'Reilly CodeZoo
in Public bookmarks by 5 users - OSPREY: Network Visualization System
in Public bookmarks - Qlucore - Home
dynamic pca
in Public bookmarks - R, the Software, Finds Fans in Data Analysts - NYTimes.com
in Public bookmarks - REViGO summarizes and visualizes long lists of Gene Ontology terms
"REViGO is a web server that can take long lists of Gene Ontology terms and summarize them by removing redundant GO terms. The remaining terms can be visualized in semantic similarity-based scatterplots, interactive graphs, or tag clouds."
in Public bookmarks - Softberry
Bioinformatics software for genome annotation and analysis of next generation sequencing data
in Public bookmarks - ssSNPer: web interface to identify statistically similar SNPs (ssSNPs) in the HapMap
"This web interface allows users to simply upload a file specifying a test SNP rs# and a file containing HapMap SNP genotype data to determine the number and location of SNPs in the surrounding region which are statistically similar and could therefore pr
in Public bookmarks - The Boost Graph Library
"... A standardized generic interface for traversing graphs is of utmost importance to encourage reuse of graph algorithms and data structures. Part of the Boost Graph Library is a generic interface that allows access to a graph's structure, but hides the details of the implementation. ..."
in Public bookmarks - TwistFlex program
"The TwistFlex program analyzes DNA flexibility at the twist angle."
in Public bookmarks - UCSC Genome Bioinformatics: FAQ
in Public bookmarks - WebLogo - About
"WebLogo is a web based application designed to make the generation of sequence logos as easy and painless as possible."
in Public bookmarks
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