- EBI Tools: Pairwise Alignment algorithms form
EBI Tools: Pairwise Sequence Alignment
alignment emboss needle pairwise water
in Public bookmarks with bioinformatics sequenceanalysis
- EBI Tools:: PPSearch - Protein motifs Search with PROSITE
"Search your query sequence for protein motifs, rapidly compare your query protein sequence against all patterns stored in the PROSITE pattern database and determine what the function of an uncharacterised protein is."
PPSearch PROSITE Search for Protein motifs
database motifs pattern ppsearch prosite protein searches
in Public bookmarks with bioinformatics
- EBI web services documentation
perl example for wsdl client
in Public bookmarks with bioinformatics perl soap webservices wsdl
- EBI:: Tools:: Pairwise Alignment algorithms form
"This tool is used to compare 2 sequences."
in Public bookmarks with bioinformatics sequenceanalysis
- Efficient Rule-Based Haplotyping Algorithms for Pedigree Data
"An overview of Jing Li's current research for ACM SRC Grand Finals. The full paper is accepted by Journal of Bioinformatics & Computational Biology and is available at website http://www.cs.ucr.edu/~jili/haplotyping.html . (An extended abstract is to app
in Public bookmarks with bioinformatics genomics
- Entrez Utilities
"Entrez Programming Utilities are tools that provide access to Entrez data outside of the regular web query interface and may be helpful for retrieving search results for future use in another environment."
Entrez Programming Utilities are tools that provide access to Entrez data outside of the regular web query interface and may be helpful for retrieving search results for future use in another environment.
abuse creating dtd e-utils entrez eutils links programming pubmed search tools utilities utils xml
in Public bookmarks with bioinformatics by 3 users
- European Nucleotide Archive Reads | EBI
"The European Nucleotide Archive accepts data generated by next-generation sequencing methodologies such 454, Illumina and ABI SOLiD. This is a new service that will provide utility for those generating and using data for such applications as genome assembly, re-sequencing for polymorphism analysis, gene expression, epigenomics and others. The data will be deposited in the European Read Archive (ERA) which works in close collaboration with the NCBI Short Read Archive (SRA). An ERA submission consists of trace data files and XML meta-data files. ERA uses the same XML meta-data formats as SRA."
in Public bookmarks with bioinformatics sequencing
- FBAT
"FBAT implements a broad class of Family Based Association Tests, adjusted for population admixture."
in Public bookmarks with bioinformatics ndar
- FuGO - Functional Genomics Investigation Ontology
"The Functional Genomics Investigation Ontology (FuGO) project seeks to develop an integrated ontology that provides both a set of 'universal' terms, i.e. terms applicable across various biological and technological domains, and domain-specific extensions
in Public bookmarks with bioinformatics genomics ontology proteomics
- Gaggle
This software aims to provide a platform for integrating data sources and analysis software important to systems biology.
in Public bookmarks with bioinformatics integration systemsbiology
- Galaxy
"Galaxy allows you to do analyses you cannot do anywhere else without the need to install or download anything. You can analyze multiple alignemnts, compare genomic annotations, profile metagenomic samples and much much more ..."
in Public bookmarks with bioinformatics genomics sequenceanalysis
- Galaxy
Galaxy allows users to retrieve and manipulate data from the UCSC genome browser: save, reload, and share data with the "history" option.
in Public bookmarks with bioinformatics genomics ndar by 2 users
- GeMS - Genomic Mutational Signature Sequences
"The GeMS project involves the identification of novel disease-related genes by screening the human genome for Genomic Mutational Signature (GeMS) sequences."
in Public bookmarks with bioinformatics diseasesignature genomics
- Gene Ontology (GO) Tools
in Public bookmarks with bioinformatics ontology
- Geneious
"Geneious does sequence alignment, 3D structure visualization, phylogenetic tree building, sequence analysis, publication-search and more; all in a single application."
in Public bookmarks with bioinformatics software
- GeneMania/Blog - Bader Lab @ The University of Toronto
in Public bookmarks with bioinformatics genomics opensource
- GenePattern Tutorial
in Public bookmarks with bioinformatics freeware microarray tutorial
- Genetics Home Reference - Your guide to understanding genetic conditions
"Genetics Home Reference provides consumer-friendly information about the effects of genetic variations on human health."
in Public bookmarks with bioinformatics consumer genetics medicine by 2 users
- GENIA tagger home page
"The GENIA tagger analyzes English sentences and outputs the base forms, part-of-speech tags, chunk tags, and named entity tags. The tagger is specifically tuned for biomedical text such as MEDLINE abstracts. If you need to extract information from biomedical documents, this tagger might be a useful preprocessing tool."
in Public bookmarks with bioinformatics language
- Genome-Phenome Superbrain Project - Home
"Genome-Phenome Superbrain (GPS) Project integrates various databases to build a comprehensive computerized encyclopedia of omic sciences."
in Public bookmarks with bioinformatics genomics omics by 2 users
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